CCP SyneRBI
Collaborative Computational Project in Synergistic Reconstruction for Biomedical Imaging
Collaborative Computational Project in Synergistic Reconstruction for Biomedical Imaging
We use Github as a repository for the CCP SyneRBI software, see https://github.com/SyneRBI/ and our software framework page for more info.
You can install our SIRF software in a few different ways, via
Please check our wiki page for more information. Here we provide links to downloadable files (the up-to-date VM is not yet available at present due to the large jump in dependencies but is expected soon).
Older versions of the VM can be found with DOI (digital object identifier) 10.5281/zenodo.3552234. Please be aware that the file size is large, so download may take a long time and even fail.
The Virtual Machine has been created with VirtualBox 6.1.22 and with the VirtualBox Guest Additions (VGA) pre-installed.
Known issues:If you have a different version of VirtualBox than 6.1.22 you might experience issues, especially running the X server. We therefore strongly recommend to sync your VGA version
We also provide pre-built Docker images.
The two Siemens raw files that are needed for certain demos are currently available
We have our own PET-MR community and SyneRBI community on Zenodo, where you can find example data sets, the VM etc.
The synergistic reconstruction training
Tools associated with the Leeds 2016 course are available here: https://github.com/SyneRBI/tools
SIRF: Synergistic Image Reconstruction Framework CPC Volume 249, April 2020, 107087
Poster for PSMR2016
Previous versions VM were SIRF 1.1.1 (10GB hard disk), SIRF 1.1.1 (30 GB hard disk), SIRF 0.9.0 and SIRF 0.9.2.